IL_4W2F_187
3D structure
- PDB id
- 4W2F (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sites
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.4 Å
Loop
- Sequence
- GACAAC*GCUAAUC
- Length
- 13 nucleotides
- Bulged bases
- 4W2F|1|CA|U|173
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4W2F_187 not in the Motif Atlas
- Homologous match to IL_4LFB_009
- Geometric discrepancy: 0.077
- The information below is about IL_4LFB_009
- Detailed Annotation
- tWH-tWH-tHW-tHW
- Broad Annotation
- No text annotation
- Motif group
- IL_12745.1
- Basepair signature
- cWW-tWH-tWH-tHW-tHW-cWW
- Number of instances in this motif group
- 1
Unit IDs
4W2F|1|CA|G|148
4W2F|1|CA|A|149
4W2F|1|CA|C|150
4W2F|1|CA|A|151
4W2F|1|CA|A|152
4W2F|1|CA|C|153
*
4W2F|1|CA|G|168
4W2F|1|CA|C|169
4W2F|1|CA|U|170
4W2F|1|CA|A|171
4W2F|1|CA|A|172
4W2F|1|CA|U|173
4W2F|1|CA|C|174
Current chains
- Chain CA
- 16S Ribosomal RNA
Nearby chains
- Chain CT
- 30S Ribosomal Protein S20
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