IL_4W2F_276
3D structure
- PDB id
- 4W2F (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sites
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.4 Å
Loop
- Sequence
- CCA*UG
- Length
- 5 nucleotides
- Bulged bases
- 4W2F|1|DA|C|995
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4W2F_276 not in the Motif Atlas
- Homologous match to IL_7RQB_035
- Geometric discrepancy: 0.1271
- The information below is about IL_7RQB_035
- Detailed Annotation
- Single bulged C
- Broad Annotation
- No text annotation
- Motif group
- IL_61258.12
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 40
Unit IDs
4W2F|1|DA|C|994
4W2F|1|DA|C|995
4W2F|1|DA|A|996
*
4W2F|1|DA|U|1159
4W2F|1|DA|G|1160
Current chains
- Chain DA
- 23S Ribosomal RNA
Nearby chains
- Chain D3
- 50S Ribosomal Protein L30
- Chain DN
- 50S Ribosomal Protein L13
- Chain DU
- 50S Ribosomal Protein L20
- Chain DV
- 50S Ribosomal Protein L21
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