IL_4W2H_052
3D structure
- PDB id
- 4W2H (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.7 Å
Loop
- Sequence
- GAUG*CUAAUC
- Length
- 10 nucleotides
- Bulged bases
- 4W2H|1|AA|U|1257, 4W2H|1|AA|A|1280
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4W2H_052 not in the Motif Atlas
- Homologous match to IL_4LFB_052
- Geometric discrepancy: 0.164
- The information below is about IL_4LFB_052
- Detailed Annotation
- 180 degree turn
- Broad Annotation
- No text annotation
- Motif group
- IL_11344.2
- Basepair signature
- cWW-cSS-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
4W2H|1|AA|G|1255
4W2H|1|AA|A|1256
4W2H|1|AA|U|1257
4W2H|1|AA|G|1258
*
4W2H|1|AA|C|1277
4W2H|1|AA|U|1278
4W2H|1|AA|A|1279
4W2H|1|AA|A|1280
4W2H|1|AA|U|1281
4W2H|1|AA|C|1282
Current chains
- Chain AA
- 16S Ribosomal RNA
Nearby chains
- Chain AC
- 30S Ribosomal Protein S3
- Chain AJ
- 30S Ribosomal Protein S10
- Chain AN
- 30S Ribosomal Protein S14
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