IL_4W4G_074
3D structure
- PDB id
- 4W4G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Postcleavage state of 70S bound to HigB toxin and AAA (lysine) codon
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- GGC*GUAC
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4W4G_074 not in the Motif Atlas
- Geometric match to IL_5FJC_003
- Geometric discrepancy: 0.2991
- The information below is about IL_5FJC_003
- Detailed Annotation
- Major groove platform with extra pair
- Broad Annotation
- Major groove platform
- Motif group
- IL_15698.3
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 10
Unit IDs
4W4G|1|RA|G|273
4W4G|1|RA|G|273|||A
4W4G|1|RA|C|273|||B
*
4W4G|1|RA|G|363|||D
4W4G|1|RA|U|363|||E
4W4G|1|RA|A|363|||F
4W4G|1|RA|C|364
Current chains
- Chain RA
- 23S rRNA
Nearby chains
No other chains within 10ÅColoring options: