IL_4W4G_119
3D structure
- PDB id
- 4W4G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Postcleavage state of 70S bound to HigB toxin and AAA (lysine) codon
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- UGAAG*CGUAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4W4G_119 not in the Motif Atlas
- Homologous match to IL_7RQB_053
- Geometric discrepancy: 0.1951
- The information below is about IL_7RQB_053
- Detailed Annotation
- tSH-tHW-tHS
- Broad Annotation
- No text annotation
- Motif group
- IL_17136.1
- Basepair signature
- cWW-tSH-tHW-tHS-cWW
- Number of instances in this motif group
- 24
Unit IDs
4W4G|1|RA|U|1357
4W4G|1|RA|G|1358
4W4G|1|RA|A|1359
4W4G|1|RA|A|1360
4W4G|1|RA|G|1361
*
4W4G|1|RA|C|1370
4W4G|1|RA|G|1371
4W4G|1|RA|U|1372
4W4G|1|RA|A|1373
4W4G|1|RA|G|1374
Current chains
- Chain RA
- 23S rRNA
Nearby chains
- Chain R1
- 50S ribosomal protein L28
- Chain R7
- 50S ribosomal protein L34
- Chain RD
- 50S ribosomal protein L2
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