3D structure

PDB id
4W4G (explore in PDB, NAKB, or RNA 3D Hub)
Description
Postcleavage state of 70S bound to HigB toxin and AAA (lysine) codon
Experimental method
X-RAY DIFFRACTION
Resolution
3.3 Å

Loop

Sequence
GCAAU*AC
Length
7 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_4W4G_195 not in the Motif Atlas
Homologous match to IL_5J7L_018
Geometric discrepancy: 0.1163
The information below is about IL_5J7L_018
Detailed Annotation
C-loop
Broad Annotation
No text annotation
Motif group
IL_03109.3
Basepair signature
cWW-cWS-tWH-cWW-L
Number of instances in this motif group
6

Unit IDs

4W4G|1|XA|G|371
4W4G|1|XA|C|372
4W4G|1|XA|A|373
4W4G|1|XA|A|374
4W4G|1|XA|U|375
*
4W4G|1|XA|A|389
4W4G|1|XA|C|390

Current chains

Chain XA
16S rRNA

Nearby chains

Chain XP
30S ribosomal protein S16

Coloring options:


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