IL_4W4G_337
3D structure
- PDB id
- 4W4G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Postcleavage state of 70S bound to HigB toxin and AAA (lysine) codon
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- GUCC*GGC
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4W4G_337 not in the Motif Atlas
- Geometric match to IL_3KTW_002
- Geometric discrepancy: 0.3309
- The information below is about IL_3KTW_002
- Detailed Annotation
- Isolated non-canonical cWW with bulges
- Broad Annotation
- Isolated non-canonical cWW with bulges
- Motif group
- IL_43275.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 30
Unit IDs
4W4G|1|YA|G|2400
4W4G|1|YA|U|2401
4W4G|1|YA|C|2402
4W4G|1|YA|C|2403
*
4W4G|1|YA|G|2414
4W4G|1|YA|G|2415
4W4G|1|YA|C|2416
Current chains
- Chain YA
- 23S rRNA
Nearby chains
- Chain Y1
- 50S ribosomal protein L28
- Chain Y6
- 50S ribosomal protein L33
- Chain Y8
- 50S ribosomal protein L35
- Chain YP
- 50S ribosomal protein L15
Coloring options: