IL_4WCE_041
3D structure
- PDB id
- 4WCE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The crystal structure of the large ribosomal subunit of Staphylococcus aureus
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.53 Å
Loop
- Sequence
- CCCAGACAA*UCGAG
- Length
- 14 nucleotides
- Bulged bases
- 4WCE|1|X|A|1090
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4WCE_041 not in the Motif Atlas
- Homologous match to IL_5J7L_284
- Geometric discrepancy: 0.2723
- The information below is about IL_5J7L_284
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_99692.2
- Basepair signature
- cWW-tSS-tSH-L-R-R-L-cWW-L-L
- Number of instances in this motif group
- 6
Unit IDs
4WCE|1|X|C|1087
4WCE|1|X|C|1088
4WCE|1|X|C|1089
4WCE|1|X|A|1090
4WCE|1|X|G|1091
4WCE|1|X|A|1092
4WCE|1|X|C|1093
4WCE|1|X|A|1094
4WCE|1|X|A|1095
*
4WCE|1|X|U|1152
4WCE|1|X|C|1153
4WCE|1|X|G|1154
4WCE|1|X|A|1155
4WCE|1|X|G|1156
Current chains
- Chain X
- 23S rRNA
Nearby chains
- Chain E
- 50S ribosomal protein L6
Coloring options: