IL_4WF9_084

3D structure

PDB id

4WF9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with telithromycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.43 Å

Loop

Sequence

AAUUC*GGCUU

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

Other IL

Broad Annotation

Other IL

Motif group

IL_05145.3

Basepair signature

cWW-cWW-cWW-cWW-cWW

Number of instances in this motif group

13

Unit IDs

4WF9|1|X|A|2122
4WF9|1|X|A|2123
4WF9|1|X|U|2124
4WF9|1|X|U|2125
4WF9|1|X|C|2126
*
4WF9|1|X|G|2217
4WF9|1|X|G|2218
4WF9|1|X|C|2219
4WF9|1|X|U|2220
4WF9|1|X|U|2221

Current chains

Chain X

23S ribosomal RNA

Nearby chains