IL_4WF9_111
3D structure
- PDB id
- 4WF9 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with telithromycin
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.43 Å
Loop
- Sequence
- ACUAUAG*CGACGAUGGUAGCCAACUUACGUUCCGCUAGAGUAGAACGUU
- Length
- 49 nucleotides
- Bulged bases
- 4WF9|1|Y|U|10, 4WF9|1|Y|U|12, 4WF9|1|Y|G|87, 4WF9|1|Y|G|105
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_77827.1
- Basepair signature
- cWW-tSS-R-L-L-R-L-cWW-tHH-L-R-L-R-L-R-L-R-L-R-L-cSH-R-R-L-R-L-R-cWW-R-cWW-R-L-R-L-R-L-R-R
- Number of instances in this motif group
- 1
Unit IDs
4WF9|1|Y|A|8
4WF9|1|Y|C|9
4WF9|1|Y|U|10
4WF9|1|Y|A|11
4WF9|1|Y|U|12
4WF9|1|Y|A|13
4WF9|1|Y|G|14
*
4WF9|1|Y|C|66
4WF9|1|Y|G|67
4WF9|1|Y|A|68
4WF9|1|Y|C|69
4WF9|1|Y|G|70
4WF9|1|Y|A|71
4WF9|1|Y|U|72
4WF9|1|Y|G|73
4WF9|1|Y|G|74
4WF9|1|Y|U|75
4WF9|1|Y|A|76
4WF9|1|Y|G|77
4WF9|1|Y|C|78
4WF9|1|Y|C|79
4WF9|1|Y|A|80
4WF9|1|Y|A|81
4WF9|1|Y|C|82
4WF9|1|Y|U|83
4WF9|1|Y|U|84
4WF9|1|Y|A|85
4WF9|1|Y|C|86
4WF9|1|Y|G|87
4WF9|1|Y|U|88
4WF9|1|Y|U|89
4WF9|1|Y|C|90
4WF9|1|Y|C|91
4WF9|1|Y|G|92
4WF9|1|Y|C|93
4WF9|1|Y|U|94
4WF9|1|Y|A|95
4WF9|1|Y|G|96
4WF9|1|Y|A|97
4WF9|1|Y|G|98
4WF9|1|Y|U|99
4WF9|1|Y|A|100
4WF9|1|Y|G|101
4WF9|1|Y|A|102
4WF9|1|Y|A|103
4WF9|1|Y|C|104
4WF9|1|Y|G|105
4WF9|1|Y|U|106
4WF9|1|Y|U|107
Current chains
- Chain Y
- 5S ribosomal RNA
Nearby chains
- Chain J
- 50S ribosomal protein L16
- Chain L
- 50S ribosomal protein L18
- Chain S
- 50S ribosomal protein L25
- Chain T
- 50S ribosomal protein L27
- Chain W
- 50S ribosomal protein L30
- Chain X
- Large subunit ribosomal RNA; LSU rRNA
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