Motif IL_77827.1 Version IL_77827.1 of this group appears in releases 3.77 to 3.90
#S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 13 | 14 | 15 | 16 | 17 | 18 | 19 | 20 | 21 | 22 | 23 | 24 | 25 | 26 | 27 | 28 | 29 | 30 | 31 | 32 | 33 | 34 | 35 | 36 | 37 | 38 | 39 | 40 | break | 41 | 42 | 43 | 44 | 45 | 1-45 | 2-43 | 3-37 | 4-36 | 5-35 | 6-34 | 10-30 | 11-29 | 12-28 | 13-27 | 14-26 | 15-25 | 16-24 | 17-23 | 18-22 | 19-21 | 39-42 | 40-41 | |||||||||||||||||||||||||||||||||||||||||||||
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1 | IL_4WF9_111 | 4WF9 | 0.0000 | 4 | Y | 5S rRNA | C | 66 | G | 67 | A | 68 | C | 69 | G | 70 | A | 71 | U | 72 | G | 73 | G | 74 | U | 75 | A | 76 | G | 77 | C | 78 | C | 79 | A | 80 | A | 81 | C | 82 | U | 83 | U | 84 | A | 85 | C | 86 | U | 88 | U | 89 | C | 90 | C | 91 | G | 92 | C | 93 | U | 94 | A | 95 | G | 96 | A | 97 | G | 98 | U | 99 | A | 100 | G | 101 | A | 102 | A | 103 | C | 104 | U | 106 | U | 107 | * | A | 8 | C | 9 | A | 11 | A | 13 | G | 14 | cWW | tsS | cwW | ncWW | ntSH | ntHH | tWH | ntHS | ncWW | ncWB | ncWW | ncWW | ncWWa | cWW | ncWw | ncSW | ncWW | cWW |
3D structures
Complete motif including flanking bases
Sequence | Counts |
---|---|
CGACGAUGGUAGCCAACUUACGUUCCGCUAGAGUAGAACGUU*ACUAUAG | 1 |
Non-Watson-Crick part of the motif
Sequence | Counts |
---|---|
GACGAUGGUAGCCAACUUACGUUCCGCUAGAGUAGAACGU*CUAUA | 1 |
Release history
Release | 3.77 | 3.78 | 3.79 | 3.80 | 3.81 | 3.82 | 3.83 | 3.84 | 3.85 | 3.86 | 3.87 | 3.88 | 3.89 | 3.90 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Date | 2023-12-06 | 2024-01-03 | 2024-01-03 | 2024-01-31 | 2024-02-28 | 2024-03-27 | 2024-04-24 | 2024-05-22 | 2024-06-19 | 2024-07-17 | 2024-08-14 | 2024-09-11 | 2024-10-09 | 2024-11-06 |
Status | New id, no parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (1)
- Basepair signature
- cWW-tSS-R-L-L-R-L-cWW-tHH-L-R-L-R-L-R-L-R-L-R-L-cSH-R-R-L-R-L-R-cWW-R-cWW-R-L-R-L-R-L-R-R
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: