IL_4WFA_055

3D structure

PDB id

4WFA (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with linezolid

Experimental method

X-RAY DIFFRACTION

Resolution

3.39 Å

Loop

Sequence

CGAUG*CUAG

Length

9 nucleotides

Bulged bases

4WFA|1|X|U|1464

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WFA_055 not in the Motif Atlas

Geometric match to IL_4WF9_054

Geometric discrepancy: 0.1528

The information below is about IL_4WF9_054

Detailed Annotation

Other IL

Broad Annotation

Other IL

Motif group

IL_74317.1

Basepair signature

cWW-tWH-tHS-cWW

Number of instances in this motif group

8

Unit IDs

4WFA|1|X|C|1461
4WFA|1|X|G|1462
4WFA|1|X|A|1463
4WFA|1|X|U|1464
4WFA|1|X|G|1465
*
4WFA|1|X|C|1624
4WFA|1|X|U|1625
4WFA|1|X|A|1626
4WFA|1|X|G|1627

Current chains

Chain X

23S rRNA

Nearby chains