IL_4WFA_122

3D structure

PDB id

4WFA (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with linezolid

Experimental method

X-RAY DIFFRACTION

Resolution

3.39 Å

Loop

Sequence

UAGGG*CCCAG

Length

10 nucleotides

Bulged bases

4WFA|1|X|A|1771

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WFA_122 not in the Motif Atlas

Homologous match to IL_4WF9_123

Geometric discrepancy: 0.2755

The information below is about IL_4WF9_123

Detailed Annotation

Partly complementary

Broad Annotation

Partly complementary

Motif group

IL_61988.1

Basepair signature

cWW-L-R-L-R-L-cWW

Number of instances in this motif group

2

Unit IDs

4WFA|1|X|U|1757
4WFA|1|X|A|1758
4WFA|1|X|G|1759
4WFA|1|X|G|1760
4WFA|1|X|G|1761
*
4WFA|1|X|C|1768
4WFA|1|X|C|1769
4WFA|1|X|C|1770
4WFA|1|X|A|1771
4WFA|1|X|G|1772

Current chains

Chain X

23S rRNA

Nearby chains