IL_4WFB_007
3D structure
- PDB id
- 4WFB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with BC-3205
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.43 Å
Loop
- Sequence
- GAGAACUG*CUUAGUACC
- Length
- 17 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4WFB_007 not in the Motif Atlas
- Geometric match to IL_4WF9_008
- Geometric discrepancy: 0.0499
- The information below is about IL_4WF9_008
- Detailed Annotation
- 9x8 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_93502.1
- Basepair signature
- cWW-L-R-tSH-tHW-tHH-tHS-cWW-cWW
- Number of instances in this motif group
- 5
Unit IDs
4WFB|1|X|G|190
4WFB|1|X|A|191
4WFB|1|X|G|192
4WFB|1|X|A|193
4WFB|1|X|A|194
4WFB|1|X|C|195
4WFB|1|X|U|196
4WFB|1|X|G|197
*
4WFB|1|X|C|204
4WFB|1|X|U|205
4WFB|1|X|U|206
4WFB|1|X|A|207
4WFB|1|X|G|208
4WFB|1|X|U|209
4WFB|1|X|A|210
4WFB|1|X|C|211
4WFB|1|X|C|212
Current chains
- Chain X
- 23S rRNA
Nearby chains
- Chain 2
- 50S ribosomal protein L34
- Chain 3
- 50S ribosomal protein L35
- Chain I
- 50S ribosomal protein L15
- Chain U
- 50S ribosomal protein L28
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