IL_4WFB_092

3D structure

PDB id

4WFB (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with BC-3205

Experimental method

X-RAY DIFFRACTION

Resolution

3.43 Å

Loop

Sequence

CA*UACG

Length

6 nucleotides

Bulged bases

4WFB|1|X|A|2599, 4WFB|1|X|C|2600

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WFB_092 not in the Motif Atlas

Homologous match to IL_4WF9_096

Geometric discrepancy: 0.0646

The information below is about IL_4WF9_096

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_44609.2

Basepair signature

cWW-cWW

Number of instances in this motif group

24

Unit IDs

4WFB|1|X|C|2539
4WFB|1|X|A|2540
*
4WFB|1|X|U|2598
4WFB|1|X|A|2599
4WFB|1|X|C|2600
4WFB|1|X|G|2601

Current chains

Chain X

23S rRNA

Nearby chains

Chain B

50S ribosomal protein L3

Chain G

50S ribosomal protein L13