IL_4WPO_189

3D structure

PDB id

4WPO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational state

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

CGAAU*AUAG

Length

9 nucleotides

Bulged bases

4WPO|1|CA|A|283

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WPO_189 not in the Motif Atlas

Homologous match to IL_7RQB_011

Geometric discrepancy: 0.0892

The information below is about IL_7RQB_011

Detailed Annotation

tSH-tHW

Broad Annotation

No text annotation

Motif group

IL_04059.1

Basepair signature

cWW-tWH-tHS-cWW

Number of instances in this motif group

13

Unit IDs

4WPO|1|CA|C|280
4WPO|1|CA|G|281
4WPO|1|CA|A|282
4WPO|1|CA|A|283
4WPO|1|CA|U|284
*
4WPO|1|CA|A|357
4WPO|1|CA|U|358
4WPO|1|CA|A|359
4WPO|1|CA|G|360

Current chains

Chain CA

23S Ribosomal RNA

Nearby chains