IL_4WQ1_125

3D structure

PDB id

4WQ1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of 70S ribosome with tRNA-Tyr and mRNA with C-A mismatch in the first position in the A-site.

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

UG*CAACAAG

Length

9 nucleotides

Bulged bases

4WQ1|1|14|C|1509

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WQ1_125 not in the Motif Atlas

Homologous match to IL_7RQB_061

Geometric discrepancy: 0.3245

The information below is about IL_7RQB_061

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_52493.1

Basepair signature

cWW-L-cWW-L-L

Number of instances in this motif group

2

Unit IDs

4WQ1|1|14|U|1482
4WQ1|1|14|G|1483
*
4WQ1|1|14|C|1506
4WQ1|1|14|A|1507
4WQ1|1|14|A|1508
4WQ1|1|14|C|1509
4WQ1|1|14|A|1510
4WQ1|1|14|A|1511
4WQ1|1|14|G|1512

Current chains

Chain 14

23S ribosomal RNA

Nearby chains