IL_4WQ1_190

3D structure

PDB id

4WQ1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of 70S ribosome with tRNA-Tyr and mRNA with C-A mismatch in the first position in the A-site.

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

UAGU*AG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WQ1_190 not in the Motif Atlas

Homologous match to IL_5J7L_015

Geometric discrepancy: 0.2875

The information below is about IL_5J7L_015

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_47074.2

Basepair signature

cWW-L-cWW-L

Number of instances in this motif group

4

Unit IDs

4WQ1|1|1G|U|249
4WQ1|1|1G|A|250
4WQ1|1|1G|G|251
4WQ1|1|1G|U|252
*
4WQ1|1|1G|A|274
4WQ1|1|1G|G|275

Current chains

Chain 1G

16S ribosomal RNA

Nearby chains

Chain 8A

30S ribosomal protein S17