IL_4WQF_026
3D structure
- PDB id
- 4WQF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational state
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.8 Å
Loop
- Sequence
- UGUAG*CGAAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4WQF_026 not in the Motif Atlas
- Geometric match to IL_7RQB_027
- Geometric discrepancy: 0.0632
- The information below is about IL_7RQB_027
- Detailed Annotation
- 5x5 Sarcin-Ricin with intercalated A; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_38862.1
- Basepair signature
- cWW-L-R-tWH-tHS-cWW
- Number of instances in this motif group
- 4
Unit IDs
4WQF|1|AA|U|905
4WQF|1|AA|G|906
4WQF|1|AA|U|907
4WQF|1|AA|A|908
4WQF|1|AA|G|909
*
4WQF|1|AA|C|961
4WQF|1|AA|G|962
4WQF|1|AA|A|963
4WQF|1|AA|A|964
4WQF|1|AA|G|965
Current chains
- Chain AA
- 23S Ribosomal RNA
Nearby chains
- Chain A0
- 50S ribosomal protein L27
- Chain AB
- 5S ribosomal RNA; 5S rRNA
- Chain AQ
- 50S ribosomal protein L16
- Chain AZ
- 50S ribosomal protein L25
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