IL_4WQF_090

3D structure

PDB id

4WQF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational state

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

CUGUGAAC*GGGAG

Length

13 nucleotides

Bulged bases

4WQF|1|AA|U|2154

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WQF_090 not in the Motif Atlas

Homologous match to IL_3U4M_004

Geometric discrepancy: 0.3266

The information below is about IL_3U4M_004

Detailed Annotation

Kink-turn

Broad Annotation

No text annotation

Motif group

IL_90775.2

Basepair signature

cWW-tSS-tSH-L-tHS-tHS-cWW

Number of instances in this motif group

30

Unit IDs

4WQF|1|AA|C|2151
4WQF|1|AA|U|2152
4WQF|1|AA|G|2153
4WQF|1|AA|U|2154
4WQF|1|AA|G|2155
4WQF|1|AA|A|2156
4WQF|1|AA|A|2157
4WQF|1|AA|C|2158
*
4WQF|1|AA|G|2177
4WQF|1|AA|G|2178
4WQF|1|AA|G|2179
4WQF|1|AA|A|2180
4WQF|1|AA|G|2181

Current chains

Chain AA

23S Ribosomal RNA

Nearby chains

Chain AC

50S ribosomal protein L1