3D structure

PDB id
4WQF (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational state
Experimental method
X-RAY DIFFRACTION
Resolution
2.8 Å

Loop

Sequence
GGAAUU*AGGAAC
Length
12 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_4WQF_150 not in the Motif Atlas
Homologous match to IL_4LFB_030
Geometric discrepancy: 0.0685
The information below is about IL_4LFB_030
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_04668.2
Basepair signature
cWW-cWW-cWW-L-R-L-R-cWW
Number of instances in this motif group
8

Unit IDs

4WQF|1|BA|G|673
4WQF|1|BA|G|674
4WQF|1|BA|A|675
4WQF|1|BA|A|676
4WQF|1|BA|U|677
4WQF|1|BA|U|678
*
4WQF|1|BA|A|712
4WQF|1|BA|G|713
4WQF|1|BA|G|714
4WQF|1|BA|A|715
4WQF|1|BA|A|716
4WQF|1|BA|C|717

Current chains

Chain BA
16S Ribosomal RNA

Nearby chains

Chain AD
50S ribosomal protein L2
Chain BF
30S ribosomal protein S6
Chain BK
30S ribosomal protein S11
Chain BR
30S ribosomal protein S18

Coloring options:


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