3D structure

PDB id
4WQF (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational state
Experimental method
X-RAY DIFFRACTION
Resolution
2.8 Å

Loop

Sequence
GAGUAG*CGCAGAUAC
Length
15 nucleotides
Bulged bases
4WQF|1|BA|A|702
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_4WQF_151 not in the Motif Atlas
Homologous match to IL_4LFB_031
Geometric discrepancy: 0.1024
The information below is about IL_4LFB_031
Detailed Annotation
Kink-turn
Broad Annotation
No text annotation
Motif group
IL_95727.1
Basepair signature
cWW-L-tSH-L-tHW-tHS-R-cWW-L
Number of instances in this motif group
1

Unit IDs

4WQF|1|BA|G|683
4WQF|1|BA|A|684
4WQF|1|BA|G|685
4WQF|1|BA|U|686
4WQF|1|BA|A|687
4WQF|1|BA|G|688
*
4WQF|1|BA|C|699
4WQF|1|BA|G|700
4WQF|1|BA|C|701
4WQF|1|BA|A|702
4WQF|1|BA|G|703
4WQF|1|BA|A|704
4WQF|1|BA|U|705
4WQF|1|BA|A|706
4WQF|1|BA|C|707

Current chains

Chain BA
16S Ribosomal RNA

Nearby chains

Chain AA
Large subunit ribosomal RNA; LSU rRNA
Chain BK
30S ribosomal protein S11
Chain BR
30S ribosomal protein S18

Coloring options:


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