IL_4WQF_264

3D structure

PDB id

4WQF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational state

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

UUGG*CUGG

Length

8 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WQF_264 not in the Motif Atlas

Geometric match to IL_3WBM_003

Geometric discrepancy: 0.226

The information below is about IL_3WBM_003

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_15225.2

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

39

Unit IDs

4WQF|1|CA|U|2098
4WQF|1|CA|U|2099
4WQF|1|CA|G|2100
4WQF|1|CA|G|2101
*
4WQF|1|CA|C|2188
4WQF|1|CA|U|2189
4WQF|1|CA|G|2190
4WQF|1|CA|G|2191

Current chains

Chain CA

23S Ribosomal RNA

Nearby chains