IL_4WQF_265

3D structure

PDB id

4WQF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational state

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

GUC*GGC

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WQF_265 not in the Motif Atlas

Geometric match to IL_5F5F_001

Geometric discrepancy: 0.3162

The information below is about IL_5F5F_001

Detailed Annotation

Isolated cWH basepair

Broad Annotation

No text annotation

Motif group

IL_10892.2

Basepair signature

cWW-cHW-cWW

Number of instances in this motif group

58

Unit IDs

4WQF|1|CA|G|2101
4WQF|1|CA|U|2102
4WQF|1|CA|C|2103
*
4WQF|1|CA|G|2186
4WQF|1|CA|G|2187
4WQF|1|CA|C|2188

Current chains

Chain CA

23S Ribosomal RNA

Nearby chains

Chain CC

50S ribosomal protein L1