IL_4WQF_296

3D structure

PDB id

4WQF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational state

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

GCG*CGU

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WQF_296 not in the Motif Atlas

Geometric match to IL_4KR9_002

Geometric discrepancy: 0.1663

The information below is about IL_4KR9_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_86319.3

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

269

Unit IDs

4WQF|1|CA|G|2852
4WQF|1|CA|C|2853
4WQF|1|CA|G|2854
*
4WQF|1|CA|C|2863
4WQF|1|CA|G|2864
4WQF|1|CA|U|2865

Current chains

Chain CA

23S Ribosomal RNA

Nearby chains

Chain CR

50S ribosomal protein L17

Chain CT

50S ribosomal protein L19

Chain DA

Small subunit ribosomal RNA; SSU rRNA