IL_4WQF_372

3D structure

PDB id

4WQF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational state

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

CGCUGAC*GGUGGAG

Length

14 nucleotides

Bulged bases

4WQF|1|AA|G|977

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WQF_372 not in the Motif Atlas

Homologous match to IL_9DFE_024

Geometric discrepancy: 0.0979

The information below is about IL_9DFE_024

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_68243.1

Basepair signature

cWW-L-cWW-cWW-R-L-tHS-cWW

Number of instances in this motif group

1

Unit IDs

4WQF|1|AA|C|891
4WQF|1|AA|G|892
4WQF|1|AA|C|893
4WQF|1|AA|U|894
4WQF|1|AA|G|895
4WQF|1|AA|A|896
4WQF|1|AA|C|897
*
4WQF|1|AA|G|973
4WQF|1|AA|G|974
4WQF|1|AA|U|975
4WQF|1|AA|G|976
4WQF|1|AA|G|977
4WQF|1|AA|A|978
4WQF|1|AA|G|979

Current chains

Chain AA

23S Ribosomal RNA

Nearby chains

Chain A3

50S ribosomal protein L30