IL_4WQR_050
3D structure
- PDB id
- 4WQR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.15 Å
Loop
- Sequence
- GG*UCAGC
- Length
- 7 nucleotides
- Bulged bases
- 4WQR|1|13|C|1200, 4WQR|1|13|A|1201
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4WQR_050 not in the Motif Atlas
- Homologous match to IL_4LFB_045
- Geometric discrepancy: 0.1073
- The information below is about IL_4LFB_045
- Detailed Annotation
- Minor groove platform
- Broad Annotation
- No text annotation
- Motif group
- IL_24264.1
- Basepair signature
- cWW-L-R-L-R-L-R-cWW
- Number of instances in this motif group
- 6
Unit IDs
4WQR|1|13|G|1057
4WQR|1|13|G|1058
*
4WQR|1|13|U|1199
4WQR|1|13|C|1200
4WQR|1|13|A|1201
4WQR|1|13|G|1202
4WQR|1|13|C|1203
Current chains
- Chain 13
- 16S ribosomal RNA
Nearby chains
- Chain 1I
- 30S ribosomal protein S10
- Chain 1K
- Transfer RNA; tRNA
- Chain 2E
- 30S ribosomal protein S3
- Chain 5I
- 30S ribosomal protein S14 type Z
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