IL_4WQU_009

3D structure

PDB id

4WQU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycin

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

CGGAC*GUG

Length

8 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WQU_009 not in the Motif Atlas

Homologous match to IL_8VTW_009

Geometric discrepancy: 0.1496

The information below is about IL_8VTW_009

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_45612.4

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

14

Unit IDs

4WQU|1|AA|C|297
4WQU|1|AA|G|298
4WQU|1|AA|G|299
4WQU|1|AA|A|302
4WQU|1|AA|C|303
*
4WQU|1|AA|G|385
4WQU|1|AA|U|386
4WQU|1|AA|G|387

Current chains

Chain AA

23S Ribosomal RNA

Nearby chains