IL_4WQU_197

3D structure

PDB id

4WQU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycin

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

CGAAU*AUAG

Length

9 nucleotides

Bulged bases

4WQU|1|CA|A|283

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WQU_197 not in the Motif Atlas

Geometric match to IL_7RQB_011

Geometric discrepancy: 0.1155

The information below is about IL_7RQB_011

Detailed Annotation

tSH-tHW

Broad Annotation

No text annotation

Motif group

IL_04059.1

Basepair signature

cWW-tWH-tHS-cWW

Number of instances in this motif group

13

Unit IDs

4WQU|1|CA|C|280
4WQU|1|CA|G|281
4WQU|1|CA|A|282
4WQU|1|CA|A|283
4WQU|1|CA|U|284
*
4WQU|1|CA|A|357
4WQU|1|CA|U|358
4WQU|1|CA|A|359
4WQU|1|CA|G|360

Current chains

Chain CA

23S Ribosomal RNA

Nearby chains