IL_4WQU_251

3D structure

PDB id

4WQU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycin

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

GGAAG*UGACAAC

Length

12 nucleotides

Bulged bases

4WQU|1|CA|C|1543

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WQU_251 not in the Motif Atlas

Homologous match to IL_7RQB_063

Geometric discrepancy: 0.0908

The information below is about IL_7RQB_063

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_02656.1

Basepair signature

cWW-L-R-L-R-L-R-L-cWW

Number of instances in this motif group

2

Unit IDs

4WQU|1|CA|G|1526
4WQU|1|CA|G|1527
4WQU|1|CA|A|1528
4WQU|1|CA|A|1528|||A
4WQU|1|CA|G|1529
*
4WQU|1|CA|U|1540
4WQU|1|CA|G|1541
4WQU|1|CA|A|1542
4WQU|1|CA|C|1543
4WQU|1|CA|A|1544
4WQU|1|CA|A|1545
4WQU|1|CA|C|1546

Current chains

Chain CA

23S Ribosomal RNA

Nearby chains