IL_4WQU_416
3D structure
- PDB id
- 4WQU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycin
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.8 Å
Loop
- Sequence
- GCA*UUCCC
- Length
- 8 nucleotides
- Bulged bases
- 4WQU|1|DA|C|934
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4WQU_416 not in the Motif Atlas
- Homologous match to IL_4LFB_037
- Geometric discrepancy: 0.2211
- The information below is about IL_4LFB_037
- Detailed Annotation
- Minor groove platform
- Broad Annotation
- No text annotation
- Motif group
- IL_47078.3
- Basepair signature
- cWW-cWS-L-cWW-L
- Number of instances in this motif group
- 4
Unit IDs
4WQU|1|DA|G|933
4WQU|1|DA|C|934
4WQU|1|DA|A|935
*
4WQU|1|DA|U|1380
4WQU|1|DA|U|1381
4WQU|1|DA|C|1382
4WQU|1|DA|C|1383
4WQU|1|DA|C|1384
Current chains
- Chain DA
- 16S Ribosomal RNA
Nearby chains
- Chain DG
- 30S ribosomal protein S7
- Chain DI
- 30S ribosomal protein S9
- Chain DW
- Transfer RNA; tRNA
- Chain DY
- Transfer RNA; tRNA
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