IL_4WQY_045

3D structure

PDB id

4WQY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

CGAUG*UAAG

Length

9 nucleotides

Bulged bases

4WQY|1|AA|U|1250

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WQY_045 not in the Motif Atlas

Homologous match to IL_7RQB_046

Geometric discrepancy: 0.1397

The information below is about IL_7RQB_046

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_68574.2

Basepair signature

cWW-tHH-tHS-cWW

Number of instances in this motif group

3

Unit IDs

4WQY|1|AA|C|1247
4WQY|1|AA|G|1248
4WQY|1|AA|A|1249
4WQY|1|AA|U|1250
4WQY|1|AA|G|1251
*
4WQY|1|AA|U|1286
4WQY|1|AA|A|1287
4WQY|1|AA|A|1288
4WQY|1|AA|G|1289

Current chains

Chain AA

23S Ribosomal RNA

Nearby chains

Chain AF

50S ribosomal protein L4

Chain AP

50S ribosomal protein L15