IL_4WQY_218

3D structure

PDB id

4WQY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

CUAAGUG*CUUAAG

Length

13 nucleotides

Bulged bases

4WQY|1|CA|U|1142, 4WQY|1|CA|A|1143

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WQY_218 not in the Motif Atlas

Homologous match to IL_4WF9_039

Geometric discrepancy: 0.0907

The information below is about IL_4WF9_039

Detailed Annotation

Kink-turn related

Broad Annotation

No text annotation

Motif group

IL_57188.6

Basepair signature

cWW-tWW-L-tWW-cWW-cSH

Number of instances in this motif group

6

Unit IDs

4WQY|1|CA|C|1018
4WQY|1|CA|U|1019
4WQY|1|CA|A|1020
4WQY|1|CA|A|1021
4WQY|1|CA|G|1022
4WQY|1|CA|U|1023
4WQY|1|CA|G|1024
*
4WQY|1|CA|C|1140
4WQY|1|CA|U|1141
4WQY|1|CA|U|1142
4WQY|1|CA|A|1142|||A
4WQY|1|CA|A|1143
4WQY|1|CA|G|1144

Current chains

Chain CA

23S Ribosomal RNA

Nearby chains

Chain C9

50S ribosomal protein L36

Chain CN

50S ribosomal protein L13