IL_4WQY_268

3D structure

PDB id

4WQY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

CCCC*GGGG

Length

8 nucleotides

Bulged bases

None detected

QA status

Self-complementary: CCCC,GGGG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WQY_268 not in the Motif Atlas

Geometric match to IL_4WF9_109

Geometric discrepancy: 0.275

The information below is about IL_4WF9_109

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_30621.4

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

66

Unit IDs

4WQY|1|CA|C|2137
4WQY|1|CA|C|2138
4WQY|1|CA|C|2139
4WQY|1|CA|C|2140
*
4WQY|1|CA|G|2151
4WQY|1|CA|G|2152
4WQY|1|CA|G|2153
4WQY|1|CA|G|2154

Current chains

Chain CA

23S Ribosomal RNA

Nearby chains

Chain CC

50S ribosomal protein L1