IL_4WQY_291

3D structure

PDB id

4WQY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

GGGG*CCGAC

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WQY_291 not in the Motif Atlas

Homologous match to IL_7RQB_109

Geometric discrepancy: 0.0686

The information below is about IL_7RQB_109

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_58764.3

Basepair signature

cWW-L-R-L-R-L-cWW

Number of instances in this motif group

11

Unit IDs

4WQY|1|CA|G|2843
4WQY|1|CA|G|2844
4WQY|1|CA|G|2845
4WQY|1|CA|G|2846
*
4WQY|1|CA|C|2870
4WQY|1|CA|C|2871
4WQY|1|CA|G|2872
4WQY|1|CA|A|2873
4WQY|1|CA|C|2874

Current chains

Chain CA

23S Ribosomal RNA

Nearby chains

Chain CE

50S ribosomal protein L3

Chain CR

50S ribosomal protein L17

Chain CT

50S ribosomal protein L19