IL_4WQY_395

3D structure

PDB id

4WQY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

GGAGCCUGUGAAC*GGGAGGCGCCGGUGAAAUAC

Length

33 nucleotides

Bulged bases

4WQY|1|CA|U|2130, 4WQY|1|CA|U|2132, 4WQY|1|CA|C|2164, 4WQY|1|CA|G|2168

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WQY|1|CA|G|2124
4WQY|1|CA|G|2125
4WQY|1|CA|A|2126
4WQY|1|CA|G|2127
4WQY|1|CA|C|2128
4WQY|1|CA|C|2129
4WQY|1|CA|U|2130
4WQY|1|CA|G|2131
4WQY|1|CA|U|2132
4WQY|1|CA|G|2133
4WQY|1|CA|A|2134
4WQY|1|CA|A|2135
4WQY|1|CA|C|2136
*
4WQY|1|CA|G|2155
4WQY|1|CA|G|2156
4WQY|1|CA|G|2157
4WQY|1|CA|A|2158
4WQY|1|CA|G|2159
4WQY|1|CA|G|2160
4WQY|1|CA|C|2161
4WQY|1|CA|G|2162
4WQY|1|CA|C|2163
4WQY|1|CA|C|2164
4WQY|1|CA|G|2165
4WQY|1|CA|G|2166
4WQY|1|CA|U|2167
4WQY|1|CA|G|2168
4WQY|1|CA|A|2169
4WQY|1|CA|A|2170
4WQY|1|CA|A|2171
4WQY|1|CA|U|2172
4WQY|1|CA|A|2173
4WQY|1|CA|C|2174

Current chains

Chain CA

23S Ribosomal RNA

Nearby chains

Chain CC

50S ribosomal protein L1