IL_4WQY_397

3D structure

PDB id

4WQY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

GCAAU*AC

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WQY_397 not in the Motif Atlas

Homologous match to IL_6CZR_127

Geometric discrepancy: 0.1567

The information below is about IL_6CZR_127

Detailed Annotation

C-loop

Broad Annotation

No text annotation

Motif group

IL_03109.2

Basepair signature

cWW-cSH-cWS-tWH-cWW

Number of instances in this motif group

5

Unit IDs

4WQY|1|DA|G|371
4WQY|1|DA|C|372
4WQY|1|DA|A|373
4WQY|1|DA|A|374
4WQY|1|DA|U|375
*
4WQY|1|DA|A|389
4WQY|1|DA|C|390

Current chains

Chain DA

16S Ribosomal RNA

Nearby chains

Chain DP

30S ribosomal protein S16