IL_4WR6_068
3D structure
- PDB id
- 4WR6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Complex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.05 Å
Loop
- Sequence
- CGAAG*CGAG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4WR6_068 not in the Motif Atlas
- Homologous match to IL_4LFB_062
- Geometric discrepancy: 0.103
- The information below is about IL_4LFB_062
- Detailed Annotation
- UAA/GAN variation
- Broad Annotation
- UAA/GAN variation
- Motif group
- IL_77691.5
- Basepair signature
- cWW-tSH-L-R-L-cWW
- Number of instances in this motif group
- 7
Unit IDs
4WR6|1|13|C|1431||||P_1
4WR6|1|13|G|1432||||P_1
4WR6|1|13|A|1433||||P_1
4WR6|1|13|A|1434||||P_1
4WR6|1|13|G|1435||||P_1
*
4WR6|1|13|C|1466||||P_1
4WR6|1|13|G|1467||||P_1
4WR6|1|13|A|1468||||P_1
4WR6|1|13|G|1469||||P_1
Current chains
- Chain 13
- 16S ribosomal RNA
Nearby chains
- Chain 1H
- Large subunit ribosomal RNA; LSU rRNA
- Chain B8
- 50S ribosomal protein L19
- Chain BI
- 30S ribosomal protein S20
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