3D structure

PDB id
4WR6 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Complex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site.
Experimental method
X-RAY DIFFRACTION
Resolution
3.05 Å

Loop

Sequence
CGU*AUG
Length
6 nucleotides
Bulged bases
None detected
QA status
Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_4WR6_269 not in the Motif Atlas
Geometric match to IL_7RQB_083
Geometric discrepancy: 0.3121
The information below is about IL_7RQB_083
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_86319.2
Basepair signature
cWW-cWW-cWW
Number of instances in this motif group
270

Unit IDs

4WR6|1|1H|C|378||||P_1
4WR6|1|1H|G|379||||P_1
4WR6|1|1H|U|380||||P_1
*
4WR6|1|1H|A|394||||P_1
4WR6|1|1H|U|395||||P_1
4WR6|1|1H|G|396||||P_1

Current chains

Chain 1H
23S ribosomal RNA

Nearby chains

Chain J8
50S ribosomal protein L28

Coloring options:


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