IL_4WR6_280
3D structure
- PDB id
- 4WR6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Complex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.05 Å
Loop
- Sequence
- GGA*UAACC
- Length
- 8 nucleotides
- Bulged bases
- 4WR6|1|1H|G|776||||P_1, 4WR6|1|1H|A|788||||P_1, 4WR6|1|1H|A|789||||P_1, 4WR6|1|1H|C|790||||P_1
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4WR6_280 not in the Motif Atlas
- Homologous match to IL_7A0S_021
- Geometric discrepancy: 0.0869
- The information below is about IL_7A0S_021
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_06549.2
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 6
Unit IDs
4WR6|1|1H|G|775||||P_1
4WR6|1|1H|G|776||||P_1
4WR6|1|1H|A|777||||P_1
*
4WR6|1|1H|U|787||||P_1
4WR6|1|1H|A|788||||P_1
4WR6|1|1H|A|789||||P_1
4WR6|1|1H|C|790||||P_1
4WR6|1|1H|C|791||||P_1
Current chains
- Chain 1H
- 23S ribosomal RNA
Nearby chains
- Chain 11
- 50S ribosomal protein L2
- Chain 31
- 50S ribosomal protein L4
- Chain E8
- 50S ribosomal protein L22
- Chain P8
- 50S ribosomal protein L34
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