IL_4WR6_284
3D structure
- PDB id
- 4WR6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Complex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.05 Å
Loop
- Sequence
- CUGUAG*CGAAGG
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4WR6_284 not in the Motif Atlas
- Homologous match to IL_7A0S_027
- Geometric discrepancy: 0.1664
- The information below is about IL_7A0S_027
- Detailed Annotation
- 5x5 Sarcin-Ricin with intercalated A; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_81631.1
- Basepair signature
- cWW-L-R-cSH-R-R-L-R-cWW
- Number of instances in this motif group
- 2
Unit IDs
4WR6|1|1H|C|857||||P_1
4WR6|1|1H|U|858||||P_1
4WR6|1|1H|G|859||||P_1
4WR6|1|1H|U|860||||P_1
4WR6|1|1H|A|861||||P_1
4WR6|1|1H|G|862||||P_1
*
4WR6|1|1H|C|915||||P_1
4WR6|1|1H|G|916||||P_1
4WR6|1|1H|A|917||||P_1
4WR6|1|1H|A|918||||P_1
4WR6|1|1H|G|919||||P_1
4WR6|1|1H|G|920||||P_1
Current chains
- Chain 1H
- 23S ribosomal RNA
Nearby chains
- Chain 16
- 5S ribosomal RNA; 5S rRNA
- Chain 88
- 50S ribosomal protein L16
- Chain I8
- 50S ribosomal protein L27
- Chain L8
- 50S ribosomal protein L30
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