IL_4WRA_053
3D structure
- PDB id
- 4WRA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Complex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site and with antibiotic paromomycin.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.05 Å
Loop
- Sequence
- UACAAAG*CAAAAAG
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4WRA_053 not in the Motif Atlas
- Homologous match to IL_4LFB_051
- Geometric discrepancy: 0.1142
- The information below is about IL_4LFB_051
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_12056.1
- Basepair signature
- cWW-L-R-R-bif-cWW
- Number of instances in this motif group
- 2
Unit IDs
4WRA|1|13|U|1247
4WRA|1|13|A|1248
4WRA|1|13|C|1249
4WRA|1|13|A|1250
4WRA|1|13|A|1251
4WRA|1|13|A|1252
4WRA|1|13|G|1253
*
4WRA|1|13|C|1284
4WRA|1|13|A|1285
4WRA|1|13|A|1286
4WRA|1|13|A|1287
4WRA|1|13|A|1288
4WRA|1|13|A|1289
4WRA|1|13|G|1290
Current chains
- Chain 13
- 16S ribosomal RNA
Nearby chains
- Chain 1F
- 30S ribosomal protein Thx
- Chain 1I
- 30S ribosomal protein S10
- Chain 5I
- 30S ribosomal protein S14 type Z
- Chain 6E
- 30S ribosomal protein S7
- Chain 8E
- 30S ribosomal protein S9
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