IL_4WSD_120
3D structure
- PDB id
- 4WSD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.95 Å
Loop
- Sequence
- CUAG*CGAAG
- Length
- 9 nucleotides
- Bulged bases
- 4WSD|1|14|A|1554
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4WSD_120 not in the Motif Atlas
- Homologous match to IL_7RQB_057
- Geometric discrepancy: 0.0715
- The information below is about IL_7RQB_057
- Detailed Annotation
- tSH-tHW
- Broad Annotation
- No text annotation
- Motif group
- IL_04059.1
- Basepair signature
- cWW-tWH-tHS-cWW
- Number of instances in this motif group
- 13
Unit IDs
4WSD|1|14|C|1437
4WSD|1|14|U|1438
4WSD|1|14|A|1439
4WSD|1|14|G|1440
*
4WSD|1|14|C|1551
4WSD|1|14|G|1552
4WSD|1|14|A|1553
4WSD|1|14|A|1554
4WSD|1|14|G|1555
Current chains
- Chain 14
- 23S ribosomal RNA
Nearby chains
No other chains within 10ÅColoring options: