IL_4WSD_390
3D structure
- PDB id
- 4WSD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.95 Å
Loop
- Sequence
- ACUCUG*CUGU
- Length
- 10 nucleotides
- Bulged bases
- 4WSD|1|14|G|1992
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4WSD_390 not in the Motif Atlas
- Homologous match to IL_9DFE_067
- Geometric discrepancy: 0.0752
- The information below is about IL_9DFE_067
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_76758.2
- Basepair signature
- cWW-L-R-L-cWW-L-L
- Number of instances in this motif group
- 7
Unit IDs
4WSD|1|14|A|1669
4WSD|1|14|C|1670
4WSD|1|14|U|1671
4WSD|1|14|C|1672
4WSD|1|14|U|1673
4WSD|1|14|G|1674
*
4WSD|1|14|C|1990
4WSD|1|14|U|1991
4WSD|1|14|G|1992
4WSD|1|14|U|1993
Current chains
- Chain 14
- 23S ribosomal RNA
Nearby chains
- Chain 25
- 50S ribosomal protein L14
- Chain 29
- 50S ribosomal protein L3
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