IL_4WSM_261

3D structure

PDB id

4WSM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of 70S ribosome with tRNA-Leu and mRNA with G-U mismatch in the first position in the A- and P-sites

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

CGAAU*AUAG

Length

9 nucleotides

Bulged bases

4WSM|1|1H|A|283

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WSM_261 not in the Motif Atlas

Geometric match to IL_7RQB_011

Geometric discrepancy: 0.1247

The information below is about IL_7RQB_011

Detailed Annotation

tSH-tHW

Broad Annotation

No text annotation

Motif group

IL_04059.1

Basepair signature

cWW-tWH-tHS-cWW

Number of instances in this motif group

13

Unit IDs

4WSM|1|1H|C|280
4WSM|1|1H|G|281
4WSM|1|1H|A|282
4WSM|1|1H|A|283
4WSM|1|1H|U|284
*
4WSM|1|1H|A|357
4WSM|1|1H|U|358
4WSM|1|1H|A|359
4WSM|1|1H|G|360

Current chains

Chain 1H

23S ribosomal RNA

Nearby chains