IL_4WSM_290
3D structure
- PDB id
- 4WSM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Complex of 70S ribosome with tRNA-Leu and mRNA with G-U mismatch in the first position in the A- and P-sites
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- GGUAAAG*CGAAAAUGAUCGGGGC
- Length
- 23 nucleotides
- Bulged bases
- 4WSM|1|1H|A|1127, 4WSM|1|1H|U|1130
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4WSM_290 not in the Motif Atlas
- Geometric match to IL_7RQB_040
- Geometric discrepancy: 0.0825
- The information below is about IL_7RQB_040
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_50715.1
- Basepair signature
- cWW-tSH-tHH-L-R-L-R-L-tWW-L-cWW-L-L-L-R-L
- Number of instances in this motif group
- 4
Unit IDs
4WSM|1|1H|G|1024
4WSM|1|1H|G|1025
4WSM|1|1H|U|1026
4WSM|1|1H|A|1027
4WSM|1|1H|A|1028
4WSM|1|1H|A|1029
4WSM|1|1H|G|1030
*
4WSM|1|1H|C|1124
4WSM|1|1H|G|1125
4WSM|1|1H|A|1126
4WSM|1|1H|A|1127
4WSM|1|1H|A|1128
4WSM|1|1H|A|1129
4WSM|1|1H|U|1130
4WSM|1|1H|G|1131
4WSM|1|1H|A|1132
4WSM|1|1H|U|1133
4WSM|1|1H|C|1135
4WSM|1|1H|G|1136
4WSM|1|1H|G|1137
4WSM|1|1H|G|1138
4WSM|1|1H|G|1139
4WSM|1|1H|C|1140
Current chains
- Chain 1H
- 23S ribosomal RNA
Nearby chains
- Chain 16
- 5S ribosomal RNA; 5S rRNA
- Chain 21
- 50S ribosomal protein L3
- Chain 58
- 50S ribosomal protein L13
- Chain 88
- 50S ribosomal protein L16
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