IL_4WSM_377
3D structure
- PDB id
- 4WSM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Complex of 70S ribosome with tRNA-Leu and mRNA with G-U mismatch in the first position in the A- and P-sites
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- CGG*CG
- Length
- 5 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4WSM_377 not in the Motif Atlas
- Geometric match to IL_7Q80_003
- Geometric discrepancy: 0.2057
- The information below is about IL_7Q80_003
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_84476.1
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 13
Unit IDs
4WSM|1|2L|C|61
4WSM|1|2L|G|62
4WSM|1|2L|G|63
*
4WSM|1|2L|C|74
4WSM|1|2L|G|75
Current chains
- Chain 2L
- tRNA-Leu
Nearby chains
- Chain 14
- Large subunit ribosomal RNA; LSU rRNA
- Chain 1L
- Transfer RNA; tRNA
- Chain 45
- 50S ribosomal protein L16
- Chain E5
- 50S ribosomal protein L27
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