IL_4WT1_413
3D structure
- PDB id
- 4WT1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Complex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.05 Å
Loop
- Sequence
- GGGAGAG*UGGUCC
- Length
- 13 nucleotides
- Bulged bases
- 4WT1|1|1G|A|665
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4WT1_413 not in the Motif Atlas
- Geometric match to IL_5TBW_476
- Geometric discrepancy: 0.392
- The information below is about IL_5TBW_476
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_31007.1
- Basepair signature
- cWW-L-R-L-R-L-R-L-R-cWW
- Number of instances in this motif group
- 5
Unit IDs
4WT1|1|1G|G|660
4WT1|1|1G|G|661
4WT1|1|1G|G|662
4WT1|1|1G|A|663
4WT1|1|1G|G|664
4WT1|1|1G|A|665
4WT1|1|1G|G|666
*
4WT1|1|1G|U|740
4WT1|1|1G|G|741
4WT1|1|1G|G|742
4WT1|1|1G|U|743
4WT1|1|1G|C|744
4WT1|1|1G|C|745
Current chains
- Chain 1G
- 16S ribosomal RNA
Nearby chains
- Chain 52
- 30S ribosomal protein S6
- Chain 6A
- 30S ribosomal protein S15
- Chain 9A
- 30S ribosomal protein S18
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