IL_4WT8_009

3D structure

PDB id

4WT8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

CUACC*GAUG

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WT8_009 not in the Motif Atlas

Homologous match to IL_4LFB_008

Geometric discrepancy: 0.1003

The information below is about IL_4LFB_008

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_64231.5

Basepair signature

cWW-cWW-L-R-L-cWW

Number of instances in this motif group

11

Unit IDs

4WT8|1|Ab|C|127
4WT8|1|Ab|U|128
4WT8|1|Ab|A|129
4WT8|1|Ab|C|130
4WT8|1|Ab|C|131
*
4WT8|1|Ab|G|223
4WT8|1|Ab|A|224
4WT8|1|Ab|U|225
4WT8|1|Ab|G|226

Current chains

Chain Ab

RNA (1504-MER)

Nearby chains

Chain AP

30S ribosomal protein S16

Chain AU

30S ribosomal protein S20