IL_4WT8_015

3D structure

PDB id

4WT8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

UUC*GA

Length

5 nucleotides

Bulged bases

4WT8|1|Ab|U|364

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WT8_015 not in the Motif Atlas

Homologous match to IL_4LFB_014

Geometric discrepancy: 0.0826

The information below is about IL_4LFB_014

Detailed Annotation

Single bulged U

Broad Annotation

No text annotation

Motif group

IL_89505.4

Basepair signature

cWW-L-cWW

Number of instances in this motif group

117

Unit IDs

4WT8|1|Ab|U|363
4WT8|1|Ab|U|364
4WT8|1|Ab|C|365
*
4WT8|1|Ab|G|388
4WT8|1|Ab|A|389

Current chains

Chain Ab

RNA (1504-MER)

Nearby chains

Chain AP

30S ribosomal protein S16

Chain DI

50S ribosomal protein L9